Is there any possible way to get 'rmse' in this code(agaricus dataset)?
0
I want to get rmse in this code, but the only thing I can do is binary classification and that means I cannot get rmse because it is metric when doing regression. Here is reproducible code.
library(caret)
library(xgboost)
data(agaricus.train, package = "xgboost")
data(agaricus.test, package = "xgboost")
train<- agaricus.train
test<- agaricus.test
#####################Train Model############################
train$label <- ifelse(train$label == 0, "no", "yes") #convert target to character or factor
xgb_grid_1 <- expand.grid(
nrounds = c(2:5),
eta = seq(0,1,0.2),
max_depth = c(2:5),
gamma = seq(0,1,0.2),
colsample_bytree = 1,
min_child_weight = 1,
subsample = 1
)
xgb_trcontrol_1 <- trainControl(
method = "cv",
number = 5,
verboseIter = TRUE,
returnData = FALSE,
returnResamp = "all",
classProbs = TRUE,
summaryFunction = twoClassSummary # I need to change this line to get regression socre
)
xgb_train1 <- caret::train(
x = as.matrix(train$data),
y = train$label,
trControl = xgb_trcontrol_1,
tuneGrid = xgb_grid_1,
metric = "ROC", # I want to get rmse instead of ROC
method = "xgbTree"
)
What should I do in this code to get rmse?
r r-caret
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
add a comment |
0
I want to get rmse in this code, but the only thing I can do is binary classification and that means I cannot get rmse because it is metric when doing regression. Here is reproducible code.
library(caret)
library(xgboost)
data(agaricus.train, package = "xgboost")
data(agaricus.test, package = "xgboost")
train<- agaricus.train
test<- agaricus.test
#####################Train Model############################
train$label <- ifelse(train$label == 0, "no", "yes") #convert target to character or factor
xgb_grid_1 <- expand.grid(
nrounds = c(2:5),
eta = seq(0,1,0.2),
max_depth = c(2:5),
gamma = seq(0,1,0.2),
colsample_bytree = 1,
min_child_weight = 1,
subsample = 1
)
xgb_trcontrol_1 <- trainControl(
method = "cv",
number = 5,
verboseIter = TRUE,
returnData = FALSE,
returnResamp = "all",
classProbs = TRUE,
summaryFunction = twoClassSummary # I need to change this line to get regression socre
)
xgb_train1 <- caret::train(
x = as.matrix(train$data),
y = train$label,
trControl = xgb_trcontrol_1,
tuneGrid = xgb_grid_1,
metric = "ROC", # I want to get rmse instead of ROC
method = "xgbTree"
)
What should I do in this code to get rmse?
r r-caret
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
2
Possible duplicate of Caret Binary Classification with RMSE
– jmuhlenkamp
Nov 24 '18 at 14:43
add a comment |
0
0
0
I want to get rmse in this code, but the only thing I can do is binary classification and that means I cannot get rmse because it is metric when doing regression. Here is reproducible code.
library(caret)
library(xgboost)
data(agaricus.train, package = "xgboost")
data(agaricus.test, package = "xgboost")
train<- agaricus.train
test<- agaricus.test
#####################Train Model############################
train$label <- ifelse(train$label == 0, "no", "yes") #convert target to character or factor
xgb_grid_1 <- expand.grid(
nrounds = c(2:5),
eta = seq(0,1,0.2),
max_depth = c(2:5),
gamma = seq(0,1,0.2),
colsample_bytree = 1,
min_child_weight = 1,
subsample = 1
)
xgb_trcontrol_1 <- trainControl(
method = "cv",
number = 5,
verboseIter = TRUE,
returnData = FALSE,
returnResamp = "all",
classProbs = TRUE,
summaryFunction = twoClassSummary # I need to change this line to get regression socre
)
xgb_train1 <- caret::train(
x = as.matrix(train$data),
y = train$label,
trControl = xgb_trcontrol_1,
tuneGrid = xgb_grid_1,
metric = "ROC", # I want to get rmse instead of ROC
method = "xgbTree"
)
What should I do in this code to get rmse?
r r-caret
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
I want to get rmse in this code, but the only thing I can do is binary classification and that means I cannot get rmse because it is metric when doing regression. Here is reproducible code.
library(caret)
library(xgboost)
data(agaricus.train, package = "xgboost")
data(agaricus.test, package = "xgboost")
train<- agaricus.train
test<- agaricus.test
#####################Train Model############################
train$label <- ifelse(train$label == 0, "no", "yes") #convert target to character or factor
xgb_grid_1 <- expand.grid(
nrounds = c(2:5),
eta = seq(0,1,0.2),
max_depth = c(2:5),
gamma = seq(0,1,0.2),
colsample_bytree = 1,
min_child_weight = 1,
subsample = 1
)
xgb_trcontrol_1 <- trainControl(
method = "cv",
number = 5,
verboseIter = TRUE,
returnData = FALSE,
returnResamp = "all",
classProbs = TRUE,
summaryFunction = twoClassSummary # I need to change this line to get regression socre
)
xgb_train1 <- caret::train(
x = as.matrix(train$data),
y = train$label,
trControl = xgb_trcontrol_1,
tuneGrid = xgb_grid_1,
metric = "ROC", # I want to get rmse instead of ROC
method = "xgbTree"
)
What should I do in this code to get rmse?
r r-caret
r r-caret
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
edited Nov 25 '18 at 1:21
jmuhlenkamp
1,418525
1,418525
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
asked Nov 24 '18 at 14:32
Dong Hyuk YangDong Hyuk Yang
84
84
2
Possible duplicate of Caret Binary Classification with RMSE
– jmuhlenkamp
Nov 24 '18 at 14:43
add a comment |
2
Possible duplicate of Caret Binary Classification with RMSE
– jmuhlenkamp
Nov 24 '18 at 14:43
2
2
Possible duplicate of Caret Binary Classification with RMSE
– jmuhlenkamp
Nov 24 '18 at 14:43
Possible duplicate of Caret Binary Classification with RMSE
– jmuhlenkamp
Nov 24 '18 at 14:43
add a comment |
0
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2
Possible duplicate of Caret Binary Classification with RMSE
– jmuhlenkamp
Nov 24 '18 at 14:43