PostgreSQL: Correct way for subset calculations












1















I have a huge table (around 10 million items). For simplicity, let's say it has only 2 columns: user_id and activity_id like this



user_id | activity_id
---------------------
1 | 1
1 | 2
1 | 3
2 | 1
2 | 2


I want to select all user_id with activity_id = 1, 2 NOT 3. In the case above it will be just one result: user_id = 2. I can do it using SELECT DISTINCT combined with INTERSECT and EXCEPT operators, but it seems to be extremely slow.



From what I know about databases, it can be improved with GIN and table partitioning, however I feel like it's not correct solution in the case of PostgreSQL (because subsets operators are slow by their own).










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  • Please post your table(s) definition(s), query, and execution plan.

    – Colin 't Hart
    3 hours ago











  • @a_horse_with_no_name activity_id=4 changes nothing in such a case. It's 10.000.000 rows.

    – Ximik
    3 hours ago











  • When you say activity id = 1, 2 do you mean 1 AND 2, or 1 OR 2?

    – Evan Carroll
    1 hour ago
















1















I have a huge table (around 10 million items). For simplicity, let's say it has only 2 columns: user_id and activity_id like this



user_id | activity_id
---------------------
1 | 1
1 | 2
1 | 3
2 | 1
2 | 2


I want to select all user_id with activity_id = 1, 2 NOT 3. In the case above it will be just one result: user_id = 2. I can do it using SELECT DISTINCT combined with INTERSECT and EXCEPT operators, but it seems to be extremely slow.



From what I know about databases, it can be improved with GIN and table partitioning, however I feel like it's not correct solution in the case of PostgreSQL (because subsets operators are slow by their own).










share|improve this question









New contributor




Ximik is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
Check out our Code of Conduct.





















  • Please post your table(s) definition(s), query, and execution plan.

    – Colin 't Hart
    3 hours ago











  • @a_horse_with_no_name activity_id=4 changes nothing in such a case. It's 10.000.000 rows.

    – Ximik
    3 hours ago











  • When you say activity id = 1, 2 do you mean 1 AND 2, or 1 OR 2?

    – Evan Carroll
    1 hour ago














1












1








1








I have a huge table (around 10 million items). For simplicity, let's say it has only 2 columns: user_id and activity_id like this



user_id | activity_id
---------------------
1 | 1
1 | 2
1 | 3
2 | 1
2 | 2


I want to select all user_id with activity_id = 1, 2 NOT 3. In the case above it will be just one result: user_id = 2. I can do it using SELECT DISTINCT combined with INTERSECT and EXCEPT operators, but it seems to be extremely slow.



From what I know about databases, it can be improved with GIN and table partitioning, however I feel like it's not correct solution in the case of PostgreSQL (because subsets operators are slow by their own).










share|improve this question









New contributor




Ximik is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
Check out our Code of Conduct.












I have a huge table (around 10 million items). For simplicity, let's say it has only 2 columns: user_id and activity_id like this



user_id | activity_id
---------------------
1 | 1
1 | 2
1 | 3
2 | 1
2 | 2


I want to select all user_id with activity_id = 1, 2 NOT 3. In the case above it will be just one result: user_id = 2. I can do it using SELECT DISTINCT combined with INTERSECT and EXCEPT operators, but it seems to be extremely slow.



From what I know about databases, it can be improved with GIN and table partitioning, however I feel like it's not correct solution in the case of PostgreSQL (because subsets operators are slow by their own).







postgresql






share|improve this question









New contributor




Ximik is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
Check out our Code of Conduct.











share|improve this question









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Check out our Code of Conduct.









share|improve this question




share|improve this question








edited 1 hour ago









Evan Carroll

31.4k865209




31.4k865209






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asked 5 hours ago









XimikXimik

1063




1063




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New contributor





Ximik is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
Check out our Code of Conduct.






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Check out our Code of Conduct.













  • Please post your table(s) definition(s), query, and execution plan.

    – Colin 't Hart
    3 hours ago











  • @a_horse_with_no_name activity_id=4 changes nothing in such a case. It's 10.000.000 rows.

    – Ximik
    3 hours ago











  • When you say activity id = 1, 2 do you mean 1 AND 2, or 1 OR 2?

    – Evan Carroll
    1 hour ago



















  • Please post your table(s) definition(s), query, and execution plan.

    – Colin 't Hart
    3 hours ago











  • @a_horse_with_no_name activity_id=4 changes nothing in such a case. It's 10.000.000 rows.

    – Ximik
    3 hours ago











  • When you say activity id = 1, 2 do you mean 1 AND 2, or 1 OR 2?

    – Evan Carroll
    1 hour ago

















Please post your table(s) definition(s), query, and execution plan.

– Colin 't Hart
3 hours ago





Please post your table(s) definition(s), query, and execution plan.

– Colin 't Hart
3 hours ago













@a_horse_with_no_name activity_id=4 changes nothing in such a case. It's 10.000.000 rows.

– Ximik
3 hours ago





@a_horse_with_no_name activity_id=4 changes nothing in such a case. It's 10.000.000 rows.

– Ximik
3 hours ago













When you say activity id = 1, 2 do you mean 1 AND 2, or 1 OR 2?

– Evan Carroll
1 hour ago





When you say activity id = 1, 2 do you mean 1 AND 2, or 1 OR 2?

– Evan Carroll
1 hour ago










3 Answers
3






active

oldest

votes


















2














You can easily do this with arrays in Postgres:



select user_id, array_agg(activity_id) as activities
from users
group by user_id
having array_agg(activity_id) @> array[1,2]
and not 3 = any(array_agg(activity_id));




The condition array_agg(activity_id) @> array[1,2] only returns those that have activity_ids 1 and 2 and the condition not 3 = any(array_agg(activity_id)) removes all those that contain activity_id = 3



If the table contains more than just those two columns, an index on (user_id, activitiy_id) will help as it enables Postgres to use an "Index Only Scan" instead of a full table scan. If there are only very users that have activity_ids 1 and two, an additional condition that only returns rows with either one of them (e.g. using a where exists condition) might help as it reduces the number of rows that need to be aggregated. In that case the index should be on (activity_id, user_id) to enable Postgres to remove unwanted rows efficiently.



On a table with 100.000 rows this ran in about 100ms on my laptop with Postgres 11 and a SSD.



Online example: https://rextester.com/YLN7221






share|improve this answer

































    1














    You can first try to rewrite the query using EXISTS and a regular (B-tree) index on user_id and activity_id.



    CREATE INDEX elbat_user_id_activity_id
    ON elbat (user_id,
    activity_id);





    SELECT DISTINCT t1.user_id
    FROM elbat t1
    WHERE EXISTS (SELECT *
    FROM elbat t2
    WHERE t2.user_id = t1.user_id
    AND t2.activity_id = '1')
    AND EXISTS (SELECT *
    FROM elbat t2
    WHERE t2.user_id = t1.user_id
    AND t2.activity_id = '2')
    AND NOT EXISTS (SELECT *
    FROM elbat t2
    WHERE t2.user_id = t1.user_id
    AND t2.activity_id = '3');


    If you have a user table, you might also want to join to that instead of retrieving the distinct user ID from the other table.






    share|improve this answer































      0














      You can use bool_or for this.



      SELECT user_id
      FROM users
      GROUP BY user_id
      HAVING bool_or(activity_id IN (1,2)) -- assumes '1, 2' mean '1 OR 2'
      AND NOT bool_or(activity_id IN (3))





      share|improve this answer























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        3 Answers
        3






        active

        oldest

        votes








        3 Answers
        3






        active

        oldest

        votes









        active

        oldest

        votes






        active

        oldest

        votes









        2














        You can easily do this with arrays in Postgres:



        select user_id, array_agg(activity_id) as activities
        from users
        group by user_id
        having array_agg(activity_id) @> array[1,2]
        and not 3 = any(array_agg(activity_id));




        The condition array_agg(activity_id) @> array[1,2] only returns those that have activity_ids 1 and 2 and the condition not 3 = any(array_agg(activity_id)) removes all those that contain activity_id = 3



        If the table contains more than just those two columns, an index on (user_id, activitiy_id) will help as it enables Postgres to use an "Index Only Scan" instead of a full table scan. If there are only very users that have activity_ids 1 and two, an additional condition that only returns rows with either one of them (e.g. using a where exists condition) might help as it reduces the number of rows that need to be aggregated. In that case the index should be on (activity_id, user_id) to enable Postgres to remove unwanted rows efficiently.



        On a table with 100.000 rows this ran in about 100ms on my laptop with Postgres 11 and a SSD.



        Online example: https://rextester.com/YLN7221






        share|improve this answer






























          2














          You can easily do this with arrays in Postgres:



          select user_id, array_agg(activity_id) as activities
          from users
          group by user_id
          having array_agg(activity_id) @> array[1,2]
          and not 3 = any(array_agg(activity_id));




          The condition array_agg(activity_id) @> array[1,2] only returns those that have activity_ids 1 and 2 and the condition not 3 = any(array_agg(activity_id)) removes all those that contain activity_id = 3



          If the table contains more than just those two columns, an index on (user_id, activitiy_id) will help as it enables Postgres to use an "Index Only Scan" instead of a full table scan. If there are only very users that have activity_ids 1 and two, an additional condition that only returns rows with either one of them (e.g. using a where exists condition) might help as it reduces the number of rows that need to be aggregated. In that case the index should be on (activity_id, user_id) to enable Postgres to remove unwanted rows efficiently.



          On a table with 100.000 rows this ran in about 100ms on my laptop with Postgres 11 and a SSD.



          Online example: https://rextester.com/YLN7221






          share|improve this answer




























            2












            2








            2







            You can easily do this with arrays in Postgres:



            select user_id, array_agg(activity_id) as activities
            from users
            group by user_id
            having array_agg(activity_id) @> array[1,2]
            and not 3 = any(array_agg(activity_id));




            The condition array_agg(activity_id) @> array[1,2] only returns those that have activity_ids 1 and 2 and the condition not 3 = any(array_agg(activity_id)) removes all those that contain activity_id = 3



            If the table contains more than just those two columns, an index on (user_id, activitiy_id) will help as it enables Postgres to use an "Index Only Scan" instead of a full table scan. If there are only very users that have activity_ids 1 and two, an additional condition that only returns rows with either one of them (e.g. using a where exists condition) might help as it reduces the number of rows that need to be aggregated. In that case the index should be on (activity_id, user_id) to enable Postgres to remove unwanted rows efficiently.



            On a table with 100.000 rows this ran in about 100ms on my laptop with Postgres 11 and a SSD.



            Online example: https://rextester.com/YLN7221






            share|improve this answer















            You can easily do this with arrays in Postgres:



            select user_id, array_agg(activity_id) as activities
            from users
            group by user_id
            having array_agg(activity_id) @> array[1,2]
            and not 3 = any(array_agg(activity_id));




            The condition array_agg(activity_id) @> array[1,2] only returns those that have activity_ids 1 and 2 and the condition not 3 = any(array_agg(activity_id)) removes all those that contain activity_id = 3



            If the table contains more than just those two columns, an index on (user_id, activitiy_id) will help as it enables Postgres to use an "Index Only Scan" instead of a full table scan. If there are only very users that have activity_ids 1 and two, an additional condition that only returns rows with either one of them (e.g. using a where exists condition) might help as it reduces the number of rows that need to be aggregated. In that case the index should be on (activity_id, user_id) to enable Postgres to remove unwanted rows efficiently.



            On a table with 100.000 rows this ran in about 100ms on my laptop with Postgres 11 and a SSD.



            Online example: https://rextester.com/YLN7221







            share|improve this answer














            share|improve this answer



            share|improve this answer








            edited 4 hours ago

























            answered 5 hours ago









            a_horse_with_no_namea_horse_with_no_name

            38.9k775112




            38.9k775112

























                1














                You can first try to rewrite the query using EXISTS and a regular (B-tree) index on user_id and activity_id.



                CREATE INDEX elbat_user_id_activity_id
                ON elbat (user_id,
                activity_id);





                SELECT DISTINCT t1.user_id
                FROM elbat t1
                WHERE EXISTS (SELECT *
                FROM elbat t2
                WHERE t2.user_id = t1.user_id
                AND t2.activity_id = '1')
                AND EXISTS (SELECT *
                FROM elbat t2
                WHERE t2.user_id = t1.user_id
                AND t2.activity_id = '2')
                AND NOT EXISTS (SELECT *
                FROM elbat t2
                WHERE t2.user_id = t1.user_id
                AND t2.activity_id = '3');


                If you have a user table, you might also want to join to that instead of retrieving the distinct user ID from the other table.






                share|improve this answer




























                  1














                  You can first try to rewrite the query using EXISTS and a regular (B-tree) index on user_id and activity_id.



                  CREATE INDEX elbat_user_id_activity_id
                  ON elbat (user_id,
                  activity_id);





                  SELECT DISTINCT t1.user_id
                  FROM elbat t1
                  WHERE EXISTS (SELECT *
                  FROM elbat t2
                  WHERE t2.user_id = t1.user_id
                  AND t2.activity_id = '1')
                  AND EXISTS (SELECT *
                  FROM elbat t2
                  WHERE t2.user_id = t1.user_id
                  AND t2.activity_id = '2')
                  AND NOT EXISTS (SELECT *
                  FROM elbat t2
                  WHERE t2.user_id = t1.user_id
                  AND t2.activity_id = '3');


                  If you have a user table, you might also want to join to that instead of retrieving the distinct user ID from the other table.






                  share|improve this answer


























                    1












                    1








                    1







                    You can first try to rewrite the query using EXISTS and a regular (B-tree) index on user_id and activity_id.



                    CREATE INDEX elbat_user_id_activity_id
                    ON elbat (user_id,
                    activity_id);





                    SELECT DISTINCT t1.user_id
                    FROM elbat t1
                    WHERE EXISTS (SELECT *
                    FROM elbat t2
                    WHERE t2.user_id = t1.user_id
                    AND t2.activity_id = '1')
                    AND EXISTS (SELECT *
                    FROM elbat t2
                    WHERE t2.user_id = t1.user_id
                    AND t2.activity_id = '2')
                    AND NOT EXISTS (SELECT *
                    FROM elbat t2
                    WHERE t2.user_id = t1.user_id
                    AND t2.activity_id = '3');


                    If you have a user table, you might also want to join to that instead of retrieving the distinct user ID from the other table.






                    share|improve this answer













                    You can first try to rewrite the query using EXISTS and a regular (B-tree) index on user_id and activity_id.



                    CREATE INDEX elbat_user_id_activity_id
                    ON elbat (user_id,
                    activity_id);





                    SELECT DISTINCT t1.user_id
                    FROM elbat t1
                    WHERE EXISTS (SELECT *
                    FROM elbat t2
                    WHERE t2.user_id = t1.user_id
                    AND t2.activity_id = '1')
                    AND EXISTS (SELECT *
                    FROM elbat t2
                    WHERE t2.user_id = t1.user_id
                    AND t2.activity_id = '2')
                    AND NOT EXISTS (SELECT *
                    FROM elbat t2
                    WHERE t2.user_id = t1.user_id
                    AND t2.activity_id = '3');


                    If you have a user table, you might also want to join to that instead of retrieving the distinct user ID from the other table.







                    share|improve this answer












                    share|improve this answer



                    share|improve this answer










                    answered 5 hours ago









                    sticky bitsticky bit

                    1,723314




                    1,723314























                        0














                        You can use bool_or for this.



                        SELECT user_id
                        FROM users
                        GROUP BY user_id
                        HAVING bool_or(activity_id IN (1,2)) -- assumes '1, 2' mean '1 OR 2'
                        AND NOT bool_or(activity_id IN (3))





                        share|improve this answer




























                          0














                          You can use bool_or for this.



                          SELECT user_id
                          FROM users
                          GROUP BY user_id
                          HAVING bool_or(activity_id IN (1,2)) -- assumes '1, 2' mean '1 OR 2'
                          AND NOT bool_or(activity_id IN (3))





                          share|improve this answer


























                            0












                            0








                            0







                            You can use bool_or for this.



                            SELECT user_id
                            FROM users
                            GROUP BY user_id
                            HAVING bool_or(activity_id IN (1,2)) -- assumes '1, 2' mean '1 OR 2'
                            AND NOT bool_or(activity_id IN (3))





                            share|improve this answer













                            You can use bool_or for this.



                            SELECT user_id
                            FROM users
                            GROUP BY user_id
                            HAVING bool_or(activity_id IN (1,2)) -- assumes '1, 2' mean '1 OR 2'
                            AND NOT bool_or(activity_id IN (3))






                            share|improve this answer












                            share|improve this answer



                            share|improve this answer










                            answered 1 hour ago









                            Evan CarrollEvan Carroll

                            31.4k865209




                            31.4k865209






















                                Ximik is a new contributor. Be nice, and check out our Code of Conduct.










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